BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D06SP1|AL429564
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1200 1456 0.0
>3x_Contig1200
Length = 5130
Score = 1456 bits (734), Expect = 0.0
Identities = 751/755 (99%), Gaps = 2/755 (0%)
Strand = Plus / Minus
Query: 1 agtngagccaatcggagaaaagacggacattatggatgtctttgtgtctctatttttgtg 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agtcgagccaatcggagaaaagacggacattatggatgtctttgtgtctctatttttgtg 695
Query: 61 tcccaaaacatagagtcatagagacattgcagcgtggtcggattaaagggacaacaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 tcccaaaacatagagtcatagagacattgcagcgtggtcggattaaagggacaacaagat 635
Query: 121 cccgccctatttcttttcttttttattcgcttgagggaggagaggcggatgggacggcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cccgccctatttcttttcttttttattcgcttgagggaggagaggcggatgggacggcga 575
Query: 181 ggtggattgaggaacactgatgttgtgtttttaagaaaatgactaacatccgggtatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ggtggattgaggaacactgatgttgtgtttttaagaaaatgactaacatccgggtatcct 515
Query: 241 ttcacgtgacacaaaataccatgacgtattgcattattgctgttacccggctttcatatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ttcacgtgacacaaaataccatgacgtattgcattattgctgttacccggctttcatatc 455
Query: 301 gctttttttgtggcacaccaaaaaccagacacaaaaacgtgtcaaaggagcgtgtctggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gctttttttgtggcacaccaaaaaccagacacaaaaacgtgtcaaaggagcgtgtctggt 395
Query: 361 tatttgctacccggatactttgatatccagagtttatagattcagttctttttttttttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tatttgctacccggatactttgatatccagagtttatagattcagttctttttttttttt 335
Query: 421 ctttggatccattttttttatcgaattttcgctgtcaaaaccyccctctctaaggccaga 480
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 334 ctttggatccattttttttatcgaattttcgctgtcaaaacctccctctctaaggccaga 275
Query: 481 tcaaagaaaaaaaaaataataaagagaaataaaatattatactagaaaaggttttactaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tcaaagaaaaaaaaaataataaagagaaataaaatattatactagaaaaggttttactaa 215
Query: 541 acagcaggttatttcagaagagttcgaaaagcttgcggacagaaaagggctagggtgcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 acagcaggttatttcagaagagttcgaaaagcttgcggacagaaaagggctagggtgcag 155
Query: 601 ttttctatcaggaagaactaaggtaatgactgattctgtaaaaccactagtggatcgtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 ttttctatcaggaagaactaaggtaatgactgattctgtaaaaccactagtggatcgtat 95
Query: 661 cgtttcgcaaccgttggaattcaagaaagctgttcaagaggactcatataacgtcggtgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 cgtttcgcaaccgttggaattcaagaaagctgttcaagaggactcatataacgtcggtgg 35
Query: 721 tgaa-ggctcttcgtatattatgatctcatcgagc 754
|||| ||||| ||||||||||||||||||||||||
Sbjct: 34 tgaagggctc-tcgtatattatgatctcatcgagc 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,671
Number of Sequences: 1807
Number of extensions: 15671
Number of successful extensions: 274
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)